PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004508610.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 190aa    MW: 21474 Da    PI: 10.4479
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004508610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.7e-113680755
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                     +Er RR++i + f  Lr+ +P+       +K +   iL +++eYIk+L+
  XP_004508610.1 36 NIERERRKKITQMFTHLRTTVPSvF-----PKATREVILNETIEYIKELE 80
                    48*********************55.....8****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.5572979IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.0E-1430100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-123194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.26E-53376No hitNo description
SMARTSM003534.4E-83585IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-83680IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MEENTKNNID PSSTISEMGN RKRVRPLGAK RDEVHNIERE RRKKITQMFT HLRTTVPSVF  60
PKATREVILN ETIEYIKELE KKKKMLEDLK EKMKSVEANL NLLIPCGNRN NSSVMVTVSS  120
NVAFFGIQSV AKPGLVTVIL KVFYNNQAEI LAANVSVDHG NLILAITALI QHRHGNSATV  180
EKIKREILSL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004508610.11e-137PREDICTED: transcription factor bHLH13-like
TrEMBLG7JJ337e-74G7JJ33_MEDTR; Helix loop helix DNA-binding domain protein
STRINGGLYMA17G02615.12e-62(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF143301314